Mr. M: More Information/Full Feature List

• Load transition lists for experiment visualization
• Limit transitions used by size, length, ion type, pI, residue motifs, and many more options.
• Load Mascot .DAT search results
• Load mzXML/pepXML search results from the Trans Proteomic Pipeline (TPP)
• Load observed MS/MS peaks from an existing spectral library
• Rapid manual review and AUC calculation correction
• Support for iterative refinement of transition lists
• Collision energy optimization support for Waters Quattro instruments.
• Plot and visualize experiment data
• Bar and whisker style plots for analyzing transition abundance and variation
• Collision energy optimization plots
• Compatible with Windows (XP and Vista), OS X, and Linux

Cluster: More Information/Full Feature List

• Easily load millions of spectra and multiple experiments.
• Finds unknown and unexpected PTMs -- even if you didn't search for it!
• Convenient reports for proteins, peptides, and Q/C information.
• Shares project data with a group of people.
• Supports many common file formats:
• Load Mascot .DAT search results
• Load X!Tandem search results
• Load mzXML/pepXML search results from the Trans Proteomic Pipeline (TPP)
• Load spectral library data

Mr. M and Cluster are software products of Single Organism Software Inc (SOSI). Please contact SOSI if you are interested in licensing or redistributing these software packages.